Microbiome definition re-visited old concepts and new challenges Microbiome Full Text
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: Skip to main content Advertisement Search Explore journals Get published About BMC My account Search all BMC articles Search Microbiome Home About Articles Sections Collections Submission Guidelines Submit manuscript Microbiome definition re-visited : old concepts and new challenges Download PDF Download PDF Commentary Open access Published : 30 June 2020 Microbiome definition re-visited : old concepts and new challenges Gabriele Berg  ORCID : orcid.org 0000-0001-9423-3101 1  na1 Daria Rybakova 1  na1 Doreen Fischer 2  na1 Tomislav Cernava 1 Marie-Christine Champomier Vergès 3 Trevor Charles 4 5 Xiaoyulong Chen 6 Luca Cocolin 7 Kellye Eversole 8  na1 Gema Herrero Corral 9 Maria Kazou 10 Linda Kinkel 11  na1 Lene Lange 12 Nelson Lima 13 Alexander Loy 14 James A . Macklin 15
: Skip to main content Advertisement Search Explore journals Get published About BMC My account Search all BMC articles Search Microbiome Home About Articles Sections Collections Submission Guidelines Submit manuscript Fig 4 Microbiome Fig 4 From : Microbiome definition re-visited : old concepts and new challenges Microbiome dynamics in time and scale . a Temporal dynamics of the microbiome is characterized by considering both the transient state of microbiome as response to environmental perturbations , such as , for example , seasonal or circadian rhythms , and the resident state that contains rather constant core microbiota . b Spatial dynamics of the microbiome is characterized by variations in the microbial composition between similar habitats separated in space . The separation may
: Skip to main content Advertisement Search Explore journals Get published About BMC My account Search all BMC articles Search Microbiome Home About Articles Sections Collections Submission Guidelines Submit manuscript Fig . 6 Microbiome Fig . 6 From : Microbiome definition re-visited : old concepts and new challenges A shift in the understanding of the microbial-host coevolution from the âseparationâ theories to the holistic approach . The hosts and their associated microbiota are assumed to have coevolved with each other , whereby different approaches are considered to describe the coevolution theory . According to the âseparationâ approach upper part of the figure the microorganisms can be divided into pathogens , neutral , and symbionts , depending on their interaction with
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